Solution

The main reference for GOLD is:

Development and Validation of a Genetic Algorithm for Flexible Docking
G. Jones, P. Willett, R. C. Glen, A. R. Leach and R. Taylor, J. Mol. Biol., 267, 727-748, 1997
[DOI: 10.1006/jmbi.1996.0897]

 

Other GOLD publications include:

Molecular recognition of receptor sites using a genetic algorithm with a description of desolvation
G. Jones, P. Willett and R. C. Glen, J. Mol. Biol., 245, 43-53, 1995
[DOI: 10.1016/S0022-2836(95)80037-9]

A new test set for validating predictions of protein-ligand interaction
J. W. M. Nissink, C. Murray, M. Hartshorn, M. L. Verdonk, J. C. Cole and R. Taylor, Proteins, 49, 457-471, 2002
[DOI: 10.1002/prot.10232]

Improved Protein-Ligand Docking Using GOLD
M. L. Verdonk, J. C. Cole, M. J. Hartshorn, C. W. Murray and R. D. Taylor, Proteins, 52, 609-623, 2003
[DOI: 10.1002/prot.10465]

Protein-Ligand Docking and Virtual Screening with GOLD
J. C. Cole, J. W. M. Nissink, R. Taylor in Virtual Screening in Drug Discovery (Eds. B. Shoichet, J. Alvarez), Taylor & Francis CRC Press, Boca Raton, Florida, USA (2005).

Modeling Water Molecules in Protein-Ligand Docking Using GOLD
M. L. Verdonk, G. Chessari, J. C. Cole, M. J. Hartshorn, C. W. Murray, J. W. M. Nissink, R. D. Taylor, and R. Taylor, J. Med. Chem., 48, 6504-6515, 2005
[DOI: 10.1021/jm050543p]

Diverse, High-Quality Test Set for the Validation of Protein-Ligand Docking Performance
M. J. Hartshorn, M. L. Verdonk, G. Chessari, S. C. Brewerton, W. T. M. Mooij, P. N. Mortenson, C. W. Murray, J. Med. Chem., 50, 726-741, 2007.
[DOI: 10.1021/jm061277y]


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